1000 1500 2000 Days 2500 3000 3500 4000 TCGA-Pancreatic Cancer Data from 450K Methylation data (n=174 tumors, 10 normal) Mishra and Guda (manuscript in preparation) 17 14 15 1 6 12 13 5 6
22 7 18 19 21 20 300 hypermethylated probes, 200 hypomethylated Hyper methylated Hypo methylated 9 10 11 National NeuroAIDS Tissue Consortium Database Cserhati et al, 2015 Assembly and annotation of large virus genomes Ten giant virus genomes assembled de novo from read sequences (~330 kbp) Paramecium bursaria Chlorella virus (PBCV) ORF discovery resulting in several hundred candidate gene sequences per strain ORF sequences tblastxd against known viral protein sequences Many new genes with unknown functions Giant viruses a new domain of life Possible functional annotation with 2D/3D Emboss programs The latest technology in Next Generation Sequencing Genome assembly of Neanderthal and Denisova in 2010 Low coverage (<5x) Denisovan tooth from cave in Siberia Nanopore technology https://www.youtube.com/watch?v=3UHw22hBpAk Summer Workshop on Bioinformatics Workshop taught by Kiran Bastola ([email protected] ) and Mark Pauley ([email protected]) at UNO Workshop Format Dates: July 2016 Four consecutive Fridays from 9am to Noon Taught at 276, PKI Four modules, one on each day Topics covered: Gquery Entrez Biological database search Vector NTI Vector NTI/Ingenuity Some useful links (hundreds of jobs) http://www.jobs.com/q-bioinformatics-l-nebraska-jobs http://www.iscb.org/iscb-careers-job-database (international level, good idea to be part of ISCB) http://jobs.sciencecareers.org/jobs/bioinformatics/ http://jobs.newscientist.com/jobs/bioinformatics/ (international) https://www.sciencemag.org/careers/features/2014/06/explosi on-bioinformatics-careers (paper with tips on how to apply for bioinformatics jobs) Acknowledgements INBRE Bioinformatics Core Personnel Babu Guda, PhD Ashok Mudgapalli, PhD Mike Gleason, PhD Sanjit Pandey, MS Support from Funding from INBRE Jim Eudy, PhD Genomics Core, UNMC Dr. Jim Turpen, UNMC Thanks for your attention!
project-based learning anyway?" I don't know why he would ask that, but for the purposes of this fantasy, it seems that any Joe-off-the-street is fascinated by your response. You respond accordingly: "PBL is the act of learning through identifying a...
On the mesoscale, Terms II-V easily can be an order of magnitude larger than their synoptic-scale magnitudes. Other large-scale CAPE and CIN modifications. Mean large-scale ascent . always. reduces CIN. Dramatic increases in low-level moisture (Fig. 7.3)
A2)Firms have little information of the consumer demand function of their competitors HI) Firms imitate growth strategies of other firms within a cluster. HIa) Firms imitate growth strategies of well- performing firms within a cluster. Vocabulary Firm- a small high-...
The Consequences of Conquest. Chapter Overview. Great Migrations. The Emergence of Farming. The Cradle of the Americas . The Northern World Takes Shape. The World of the Indian Peoples Overview. The Reconquista. The Age of Exploration . New Ideas Take...
Pupils take a test (SATS) in reading and maths. The test results are used to inform teacher assessment. There is no test for writing, although there is a non statutory grammar, punctuation and spelling test.
Ready to download the document? Go ahead and hit continue!